以苯为例进行说明:
点击SCM logo > View > Properties > QTAIM(Topology)显示如下:
灰白色的球是(3,-3),与原子核位置一致,绿色的球是环临界点,红色的球是键临界点,线条是键径。鼠标放置在CP上时,会显示坐标值,该坐标值单位为Bohr,1 Bohr=0.52917721 Å,而Out文件中显示的坐标单位是Å。
点击窗口左下方AIM > Show details,可以看到表示原子、键、环、笼临界点的小球的各种颜色,例如:
SCM - Output - Bond path 往上翻,就是各个临界点的各种数据,例如:
CP # 25 (RANK,SIGNATURE): (3,-1) CP COORDINATES: 0.000000 1.799289 -5.263447 EIGENVALUES OF HESSIAN MATRIX: -0.7744589E+00 -0.7639204E+00 0.5386842E+00 EIGENVECTORS (ORTHONORMAL) OF HESSIAN MATRIX (COLUMNS): 0.2396951E-17 0.1000000E+01 -0.4151615E-17 -0.5000023E+00 0.4793880E-17 0.8660241E+00 0.8660241E+00 0.0000000E+00 0.5000023E+00 HESSIAN MATRIX: -0.7639204E+00 -0.4720628E-17 -0.2725845E-17 0.2103954E+00 0.5686094E+00 -0.4461701E+00 VALUES OF SOME FUNCTIONS AT CPs (a.u.): Rho = 0.2854255E+00 |GRAD(Rho)| = 0.4797565E-15 GRAD(Rho)x = -0.6094092E-17 GRAD(Rho)y = 0.2437286E-15 GRAD(Rho)z = 0.4131894E-15 Laplacian = -0.9996951E+00 (-1/4)Del**2(Rho)) = 0.2499238E+00 Diamond = 0.1473542E+01 Metallicity = -0.8529043E+01 Ellipticity = 0.1379520E-01 INHOMOGENEITY PARAMETERS AT CPs (a.u.) Delta_u = 0.6976387E+00 Delta_s = 0.5999796E+00 Delta_t = 0.7588694E+00 Inhom_s = 0.1666723E+01 Inhom_ex = 0.1167634E+01 ENERGY COMPONENTS AT CPs (a.u.) Gb(Abramov) = 0.1886526E+00 Vb(Abramov) = -0.6272290E+00 Hb(Abramov) = -0.4385764E+00 Ex_ueg = -0.1387955E+00 Ec_ueg = -0.1763575E-01 Delta_ex = 0.1018033E+00 Delta_ec = 0.2304692E-01 Delta_et = -0.5607528E+00 Pxc = 0.7870122E+01 Qxc = 0.4417219E+01
其中:
电中性体系的氢键键能估算:E$_{HB}$ = -223.08*ρ$_{BCP}$+0.7423,其中ρ$_{BCP}$为氢键BCP处电子密度,单位为a.u.(ADF默认输出的电子密度单位即a.u.),E$_{HB}$单位为kcal/mol,参考: